Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945715.1_cds_XP_016488124.1_78792
CDS Infomation

[gene=LOC107808145] [db_xref=GeneID:107808145] [protein=FACT complex subunit SSRP1-like] [protein_id=XP_016488124.1] [location=join(32358..32411,32915..33100,33707..33812,34122..34258,34425..34508,34625..34719,34803..34911,35063..35149,35226..35318,35462..35659,35744..35889,35979..36120,36276..36374,36465..36635,37537..37615,37798..37925)] [gbkey=CDS]
Sequence

ATGACGGACGGTCATCAGTTCAACAACATCTCTCTCGGCGGCCGTGGAGGCACCAATCCA
GGGCAGCTCAAGGTTCAGTCGGGAGGTATACTATGGAAGAAACAGGGTGGTGGTAAGGCT
GTGGAGGTGGACAAGGAAGACATAGTGGGCCTTACTTGGATGAAGGTTCCTCGAACTAAT
CAGCTGGGTGTACGGATCAAGGATGGTCTCTACTACAAATTTACTGGCTTCCGTGACCAG
GATGTTGCGAGTTTGACCACCTATTTCCAGAATACTTGCGGGATATCTCCGGAGGAAAAG
CAGCTATCAGTTAGTGGAAAAAATTGGGGAGAAGTTGATCTAAATGGGAATATGCTTGCT
TTTCTTGTTGGTTCTAAGCAAGCATTTGAGATATCATTAGCAGATGTTTCGCAAACACAG
CTTCAAGGAAAAAATGATGTCATGTTGGAGTTCCATGTAGATGATACAACTGGGGCTAAT
GAGAAAGACTCGCTGATGGAAATCAGCTTTCACATCCCCAACTCAAACACTCAATTTGTT
GGTGATGAAAACCGACCTCCTGCTCAAGTTTTCAGGGACAAAATCATGTCGATGGCTGAT
GTTGGTGCCGGAGGTGAGGAAGCTGTTGTCACATTTGACGGCATTGCCATACTTACTCCA
AGGGGCCGTTACAATGTTGAGCTTCATCTCTCATTCTTGCGCTTGCAAGGGCAAGCCAAT
GACTTTAAAATTCAATACAGCAGCGTAGTTCGTATTTTTTTGTTGCCGAAGCATAACCAA
CCACACACTTTAGTAGTTATCACTCTTGATCCTCCGATTAGGAAGGGGCAAACTTTGTAT
CCACACATTGTATTGCAGTTTGAGACAGACAATGTGGTAGATCTTTCGCTGGCTTTGAGT
GAAGATCTTTTAAATACGAAATACAAAGATAGGCTGCTTCTGGGTTACAAGGGTCTTATC
CATGACATCTTTACTCAAATTTTACGCGGCTTGTCTGGTGCCAAAGTCACTAAACCGGGG
AAGTTCCGTAGCAGTCAAGATGGGTATGCGGTGAAGTCTTCGTTGAAAGCTGAAGATGGA
CTTCTCTATCCTCTTGAAAAGAGCTTCTTCTTCTTACCTAAACCACCAACTCTTATACTG
CATGAGGAGATTGATTATGTGGAGTTTGAGAGGCACGCTGCGGGCACAGCCAACATGCAT
TACTTTGATCTTCTCATAAGACTGAAGACTGAACAAGAACATCTTTTCCGGAATATCCAG
AGAAATGAGTACCACAATCTTTTTGATTTCATCAGTTCAAAGGGTCTGAAAATAATGAAC
CTTAATGAAGCTCGGGCGACAGAAGGTGTTCCTGTTTTGCCTGATGAAGATGATGCTGTT
GATCCACATCTTGAGCGTATTAAGAATGAAGCGGGTGGAGATGATAGTGATGAAGAGGAC
GAAGATTTTGTCCTTGACAAGGATGATGGTGGATCTCCTACTGATGATTCTGGAGGGGAT
GAATCTGATGCCAGTGATAGTGGTGGTGAAAAAGAGAAACCTGCAAAGAAGCCCAAAAAG
GAGGTTACTGTGTCAAAGCCATCTGCAAGCAGGAAAAAGGCAGATGACGATGGATCGAAG
AAGAAGAAACAGAAAAAGAAGAAGGATCCAAATGCTCCGAAGAGGGCAATTAGTGCGTTC
ATGTTCTTCTCACAGAGTGAAAGAGAGAGTGTGAAGAAAAGTTTTCCTGGAATCACCTTC
ACTGAGACTGGGAAGGTTCTTGGTGAAAGATGGAATAAGCTGTCAGCTGAGGAGAAAGAA
CCCTATGAGGCAATGGCTAGGGCAGATAAGAAGCGCTACAGCGAACAGATCAGTGGTTAC
AAGAACCCTCAGTCGACCGCCATGGATTCAGGGAATGAATCTGAGAGTTCCTAA

Peptide Sequence

PEP ID

XP_016488124.1
PEP Infomation

PREDICTED: FACT complex subunit SSRP1-like [Nicotiana tabacum]
Sequence

MTDGHQFNNISLGGRGGTNPGQLKVQSGGILWKKQGGGKAVEVDKEDIVGLTWMKVPRTN
QLGVRIKDGLYYKFTGFRDQDVASLTTYFQNTCGISPEEKQLSVSGKNWGEVDLNGNMLA
FLVGSKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNTKYKDRLLLGYKGLIHDIFTQILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLNEARATEGVPVLPDEDDAVDPHLERIKNEAGGDDSDEED
EDFVLDKDDGGSPTDDSGGDESDASDSGGEKEKPAKKPKKEVTVSKPSASRKKADDDGSK
KKKQKKKKDPNAPKRAISAFMFFSQSERESVKKSFPGITFTETGKVLGERWNKLSAEEKE
PYEAMARADKKRYSEQISGYKNPQSTAMDSGNESESS

Transcript Sequence

Gene sequence data has not been registered.